|
Bioconductor: |
bioconductor is an open
source and open development software project for
the analysis and comprehension of genomic
data. |
|
Blast: |
basic local alignment search
tool |
|
Autodock: |
suite of automated docking
tools that is designed to predict how small
molecules, such as substrates or drug candidates,
bind to a receptor of known 3D
structure |
|
Bioperl: |
collection of perl modules
that facilitate the development of perl scripts
for bioinformatics applications |
|
BlastZ: |
independent implementation of
the gapped blast algorithm specifically designed
for aligning two long genomic
sequences |
|
Definiens: |
The Definiens Enterprise Image IntelligenceSuite is a comprehensive image analysis platform for two-dimensional (2D) image analysis. It contains all the client and server software needed to extract intelligence from any digital image in a fully-automated or semi-automated way.
The client software is role-based and supports the needs and skills of different users in an organization. The server software, known as the Definiens eCognition® Server, is a processing environment that allows the batch processing of jobs. It is hugely scaleable, capable of handling millions of images in a single job. |
|
Ensembl: |
freely available software
system for genomic analysis that cope well with
rough draft data |
|
Gromacs: |
open-source molecular
dynamics package |
|
Imaris: |
Imaris is Biplane’s core software module that delivers all the necessary functionality for visualization, segmentation and interpretation of 3D and 4D microscopy datasets. Combining speed, precision and ease-of-use, Imaris provides a complete set of features for working with three- and four-dimensional multi-channel images of any size, from a few megabytes to multiple gigabytes in size. Conveniently load, process and visualize images acquired from almost any confocal and wide field microscope to gain new and groundbreaking insight from your image data. |
|
Matlab: |
tool for doing numerical
computations with matrices and
vectors |
|
MySQL: |
open-source
database |
| pgSQL: |
open-source
database |
| R: |
R is a open source software for statistical computing and
graphics |
|
S-Plus/Insightful Miner: |
statistics software and data
mining software |
