CUDA-MEME software available
Posted on Thursday, October 15, 2009 at 12:30 PM by Bertil Schmidt
The CUDA-MEME software for motif finding with the MEME algorithm on CUDA-compatible GPUs is availble at: http://sites.google.com/site/yongchaosoftware/Home/cuda-meme. The paper describing CUDA-MEME has also been accepted for publication:
Y. Liu, B. Schmidt, W. Liu, D. Maskell: "CUDA-MEME: Accelerating Motif Discovery in Biological Sequences Using CUDA-enabled Graphics Processing Units", Pattern Recognition Letters, in press, doi:10.1016/j.patrec.2009.10.009
Edited on: Thursday, November 05, 2009 6:13 PMPosted in (RSS)