Bertil's List of Publications
Posted on Tuesday, July 15, 2008 at 2:53 PM by Bertil Schmidt
Edited Books and Book Chapters
- B. Schmidt, C. Chen, W. Liu, W. Mitchell: "PheGee@Home: A Grid-based Tool for Comprative Genomics", Handbook of Research on Compuational Grid Technologies for Life Science, Biomedicine and Healthcare, IGI Global, 2009 (ISBN: 978-1-60566-374-6)
- J. Rajapakse, B. Schmidt, G. Volkert, Proceedings of the 2nd IAPR Workshop on Pattern Recognition in Bioinformatics (PRIB 2007), Lecture Notes in Bioinformatics, Springer, LNCS Volume 4774, 2007 (ISBN: 978-3-540-75285-1)
- B. Schmidt, W. Liu, C. Chen: "Hierarchical Grid Computing for High Performance Bioinformatics", in Grids for Bioinformatics and Computational Biology, Wiley & Sons Book Series on Bioinformatics, 2007 (ISBN: 978-0-471-78409-8)
- B. Schmidt, H. Schroeder: "Special-Purpose Computing for Biological Sequence Analysis", in Parallel Computing in Bioinformatics and Computational Biology, Wiley Book Series on Parallel and Distributed Computing, John Wiley & Sons, New York, 2005 (ISBN: 0-471-71848-3)
- F.K. Fuss, S. L. Chia, S.S. Venkatraman, S.M. Krishnan, B. Schmidt, Proceedings of the International BioEngineering Conference 2004 (IBEC 2004), Singapore 2004 (ISBN: 981-05-1946-X)
- B. Schmidt, M. Schimmler, H. Schroeder: "High-Speed Cryptography", in: Embedded Cryptographic Hardware: Methodologies & Architectures, Nova Science Publishers, 2004 (ISBN: 1-59454-012-8)
Journals
- Y. Liu, B. Schmidt, W. Liu, D. Maskell: "CUDA-MEME: Accelerating Motif Discovery in Biological Sequences Using CUDA-enabled Graphics Processing Units", Pattern Recognition Letters, in press, doi:10.1016/j.patrec.2009.10.009 (Impact factor: 1.559)
- J. Schroder, H. Schroder, S. Puglisi, R. Sinha, B. Schmidt: "SHREC: A short-read error correction method", Bioinformatics, Vol. 25, No. 17, pp. 2157-2163, 2009 (Impact factor: 4.328)
- B. Schmidt, R. Sinha, B. Beresford-Smith, S. Puglisi: "A Fast Hybrid Short Read Fragment Assembly Algorithm", Bioinformatics, Vol. 25, No. 17, pp. 2279-2280, 2009 (Impact factor: 4.328)
- T. Oliver, B. Schmidt, Y. Jacop, D. Maskell: "High-Speed Biological Sequence Analysis with Hidden Markov Models on Reconfigurable Platforms", IEEE Transactions on Information Technology in Biomedicine, Vol. 13, No. 5, pp. 740-746, 2009 (Impact factor: 1.939)
- Y. Liu, D. Maskell, B. Schmidt: "CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units", BMC Research Notes, 2:73, 2009
- A. Wirawan, B. Schmidt, H. Zhang, C.K. Kwoh: "High Performance Protein Sequence Database Scanning on the Cell B.E. Processor", Scientific Programming, Vol. 17, No. 1-2, pp. 97-111, 2009
- A. Wirawan, C.K. Kwoh, T.H. Nim, B. Schmidt: "CBESW: Sequence Alignment on the Playstation 3" BMC Bioinformatics, Vol. 9:377, 2008 (Impact factor: 3.781)
- T. Oliver, Y.Y. Leow, B. Schmidt: "Integrating FPGA Acceleration into HMMer", Parallel Computing, Vol. 34, No. 11, pp.681-691, 2008 (Impact factor: 1.309)
- W. Liu, B. Schmidt, G. Voss, W. Mueller-Wittig: "Accelerating Molecular Dynamics simulations using Graphics Processing Units with CUDA", Computer Physics Communications, Vol. 179, No. 9, pp. 634-641, 2008 (Impact factor: 2.120)
- D.T. Singh, R.Trehan, B. Schmidt, T. Bretschneider: "Comparative Phyloinformatics of Virus Genes at Micro and Macro Levels in a Distributed Computing Environments", BMC Bioinformatics, Vol. 9:S23, 2008 (Impact factor: 3.781)
- A. Singh, C. Chen, W. Liu, W. Mitchell, B. Schmidt: "A Hybrid Computational Grid Architecture for Comparative Genomics", IEEE Transactions on Information Technology in Biomedicine, Vol. 12, No. 2, pp. 218-225, March 2008 (Impact factor: 1.939)
- M. Rajapakse, B. Schmidt, F. Lin, V. Brusic: "Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms", BMC Bioinformatics, 2007, 8:459 (Impact factor: 3.781)
- W. Liu, B. Schmidt, G. Voss, W. Mueller-Wittig, "Streaming Algorithms for Biological Sequence Alignment on GPUs", IEEE Transactions on Parallel and Distributed Systems, Vol. 18, No. 9, pp. 1270-1281, 2007 (Impact factor: 1.916)
- F. Lin,, H. Schroeder, B. Schmidt.: "Solving the Bottleneck Problem in Bioinformatics Computing: an Architectural Perspective", Journal of VLSI Signal Processing Systems, Springer, Vol. 48, No. 3, pp185-188, 2007 (Impact factor: 0.779)
- W. Liu, B. Schmidt, W. Mueller-Wittig: "Performance Analysis of General-Purpose Computation on Commodity Graphics Hardware: A Case Study Using Bioinformatics", Journal of VLSI Signal Processing Systems, Springer, Vol. 48, No. 3, pp. 209-221, 2007 (Impact factor: 0.779)
- J.P. Walters, X. Meng, V. Chaudhary T. Oliver, Y.Y Leow, B. Schmidt, D. Nathan J. Landman: "MPI-HMMER-Boost: Distributed FPGA Acceleration", Journal of VLSI Signal Processing Systems, Springer, Vol. 48, No. 3, pp. 223-238, 2007 (Impact factor: 0.779)
- B. Schmidt: "A Survey of Desktop Grid Applications for E-Science", International Journal of Web and Grid Services, Vol. 3. No. 3, pp. 354-368, 2007 (Impact factor: -)
- M. Schimmler, B. Schmidt, H.-W. Lang, S. Heithecker: "An Area-Efficient Bit-Serial Integer and GF(2n) Multiplier", Microelectronic Engineering, Vol. 82, No. 2, pp. 253-259, February 2007. (Impact factor: 1.583)
- M. Rajapakse, G.L. Zhang, K.N. Srinivasan, B. Schmidt, N. Petrovsky, V. Brusic: "PREDNOD, a prediction server for peptide binding to the H-2g7 haplotype of the nonobese diabetic mouse", Autoimmunity, Vol. 39 No. 8, pp. 645-650, December 2006 (Impact factor: 2.525)
- C. Chen, B. Schmidt: "Constructing Large Suffix Trees on a Computational Grid", Journal of Parallel and Distributed Computing, Vol. 66, No. 12, pp.1512-1523, December 2006 (Impact factor: 1.168)
- W. Liu, B. Schmidt: "A Parallel Pattern-based System for High Performance Computational Biology", IEEE Transactions on Parallel and Distributed Systems, Vol. 17, No. 8, pp. 750-763, August 2006 (Impact factor: 1.916)
- T. Oliver, B. Schmidt, D. Maskell, D. Nathan, R. Clemens: "High-speed multiple sequence alignment on a reconfigurable platform", International Journal of Bioinformatics Research and Applications, Vol. 2, No. 4, pp. 394-406, 2006 (Impact factor: -)
- Z. Du, F. Lin, B. Schmidt: "Accomplishments and Challenges in High Performance Computing for Computational Biology", Current Bioinformatics, Vol. 1, No. 2, pp. 185-195, May 2006 (Impact factor: 1.255)
- W. Liu, B. Schmidt: "Mapping of Hierarchical Parallel Genetic Algorithms for Protein Folding onto Computational Grids", IEICE Transactions on Information and Systems, E89-D(2):589-596, February 2006 (Impact factor: 0.369)
- T. Oliver, B. Schmidt, D. Nathan, R. Clemens, D. Maskell: "Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW", Bioinformatics, Vol. 21, No. 16, pp. 3431-3432, 2005. (Impact factor: 4.328)
- T. Oliver, B. Schmidt, D. Maskell: "Reconfigurable Architectures for Bio-sequence Database Scanning on FPGAs", IEEE Transactions on Circuits and Systems II, Vol. 52, No. 12, pp. 851-855, 2005 (Impact factor: 1.436)
- C. Chen, B. Schmidt: "An Adaptive Grid Implementation of DNA Sequence Alignment", Future Generation Computer Systems, Vol. 21, No. 7, pp. 988-1003, 2005 (Impact factor: 1.476)
- T. Liu, B. Schmidt: "Parallel RNA Secondary Structure Prediction using Stochastic Context-Free Grammars", Concurrency and Computation: Practice and Experience, Vol. 17, No. 14, pp. 1669-85, 2005 (Impact factor: 1.791)
- B. Schmidt, M. Schimmler: "A Bit-Serial Floating-Point Unit for a massively parallel system on a chip", Journal of Parallel Algorithms and Architectures, Vol. 19, No. 2-3, pp. 79-96, 2004 (Impact factor: -)
- B. Schmidt, M. Schimmler, H. Schroeder: "A massively parallel architecture for public-key cryptography", International Journal of Computer Research, accepted for publication in 2004. (Impact factor: -)
- B. Schmidt, F. Lin, A. Laud, Y. Santoso: "Development of Distributed Bioinformatics Applications with GMP", Concurrency and Computation: Practice and Experience, Vol. 16, pp. 945-959, 2004 (Impact factor: 1.791)
- B. Schmidt, H. Schroeder, M. Schimmler: "A hybrid architecture for bioinformatics", Future Generation Computer Systems, No. 18, pp. 855-862, 2002 (Impact factor: 1.476)
- B. Schmidt, H. Schroeder: "A hybrid Architecture for Multimedia Processors", Computing and Informatics, Vol. 20, No. 9, pp. 225-244, 2001. (Impact factor: 0.492)
- B. Schmidt, M. Schimmler, H. Schroeder: "Tomographic Image Reconstruction on the Instruction Systolic Array", Computing and Informatics, Vol. 20, No. 1, pp. 27-42, 2001. (Impact factor: 0.492)
- B. Schmidt, M. Schimmler: "KPROC - An Instruction Systolic Architecture for Parallel Prefix Applications", Parallel and Distributed Computing Practices, Vol. 3, No. 2, 2000. (Impact factor: -)
- B. Schmidt, H. Schroeder, M. Schimmler: "A Morphological Approach to Hough Transform on the Instruction Systolic Array", Computers and Artificial Intelligence, Vol. 18, No. 6, pp. 541-557, 1999. (Impact factor: 0.492)
Conferences
- Y. Liu, B. Schmidt, D.L. Maskell: MSA-CUDA: Multiple Sequence Alignment on Graphics Processing Units with CUDA, 20th IEEE International Conference on Application-specific Systems, Architectures and Processors (ASAP 2009), Boston, MA, IEEE Press, to appear (BEST PAPER AWARD)
- A. Wirawan, B. Schmidt, C.K. Kwoh: "Pairwise Distance Matrix Computation for Multiple Sequence Alignment on the Cell Broadband Engine", The International Conference on Computational Science 2009 (ICCS 2009), Baton Rouge, Louisiana, Springer, LNCS, to appear
- H. Shi, B. Schmidt, W. Liu, K. Mueller-Wittig: "Accelerating Error Correction in High-Throughput Short-Read DNA Sequencing Data with CUDA", 8th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2009), Rome, Italy, IEEE Press, to appear
- Y. Liu, B. Schmidt, D. Maskell: "Parallel Reconstruction of Neighbor-Joining Trees for Large Multiple Sequence Alignments using CUDA", 8th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2009), Rome, Italy, IEEE Press, to appear
- Y. Chen, B. Schmidt, D. Maskell: "A Reconfigurable Bloom Filter Architecture for BLASTN", 22nd International Conference on Architectures of Computing Systems (ARCS 2009), Delft, Netherlands, Springer, LNCS Vol. 5455, pp. 40-49, 2009
- C. Chen, B. Schmidt, W. Liu, W. Mueller-Wittig: "GPU-MEME: Using Graphics Hardware to Accelerate Motif Finding in DNA Seqeunces", PRIB 2008, Springer, Lecture Notes in Bioinformatics, Vol. 5265, pp.448-459, 2008.
- H. Zhang, B. Schmidt, W. Mueller-Wittig: "Accelerating BLASTP on the Cell Broadband Engines", PRIB 2008, Springer, Lecture Notes in Bioinformatics, Vol. 5265, pp. 460-470, 2008.
- N.T. Hieu, C.K. Kwoh. A. Wirawan, B. Schmidt: "Applications of Heterogeneous Structure of Cell Broadband Engine Architecture for Biological Database Similarity Search", 2nd International Conference on Bioinformatics and Biomedical Engineering (iCBBE2008), IEEE Press, pp. 5-8 (2008)
- W. Liu, B. Schmidt, G.Voss, W. Mueller-Wittig: "Molecular Dynamics Simulations on Commodity GPUs With CUDA" 14th IEEE International Conference on High Performance Computing (HiPC 2007), Goa, India, Springer, LNCS, Vol. 4873
- M.Y.H. Low, W. Liu, B. Schmidt, "A Parallel BSP Algorithm for Irregular Dynamic Programming", 7th International Symposium on Advanced Parallel Processing Technologies (APPT 2007), Springer, LNCS Vol. 4847, pp. 151-160, 2007
- A. Wirawan, B. Schmidt, C.K. Kwoh: "Parallel DNA Sequence Alignment on the Cell Broadband Engine",7th International Conference on Parallel Processing and Applied Mathematics (PPAM 2007), Gdansk, Poland, Springer, LNCS Vol. 4967, pp. 1249-1256, 2008
- L.A. Aung, D. Maskell, T. Oliver, B. Schmidt: "C-based Design Methodology for FPGA Implementation of ClustalW MSA", Pattern Recognition in Bioinformatics (PRIB 2007), Springer LNCS Vol. 4774, pp. 11-18, 2007
- R. Trehan, D.T. Singh, B. Schmidt: "Phylogenetic Analysis of Neuraminidase Genes of H5N1 Isolates using HPC technologies", 9th International Conference on e-Health Networking, Application and Services (IEEE Healthcom 2007), IEEE Press, pp. 285-288, 2007
- C. Chen, A. Singh, W. Mitchell, B. Schmidt: "Phenotype Genotype Exploration on a Desktop GPU Grid", 3rd International Workshop on Grid Computing and Applications, World Scientific, pp.154-165, 2007
- W. Liu, W. Mueller-Wittig, B. Schmidt: "Performance Predictions for General-Purpose Computation on GPUs", International Conference on Parallel Processing (ICPP 2007), XiAn, China, IEEE Press, 2007
- T. Oliver, Y.Y. Leow, B. Schmidt: "High Performance Database Searching with HMMer on FPGAs", 6th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2007), Long Beach, CA, IEEE Press, 2007.
- J. Feng, S. Chakraborty, B. Schmidt, W. Liu, U.D. Bordoloi: "Fast Schedulability Analysis Using Commodity Graphics Hardware", 13th IEEE International Conference on Embedded and Real-Time Computing Systems and Applications (RTCSA 2007), IEEE Press, pp.400-408, 2007
- W. Liu, B. Schmidt, G. Voss, W. Mueller-Wittig: "GPU-ClustalW: Using Graphics Hardware to Accelerate Multiple Sequence Alignment", 13th IEEE International Conference on High Performance Computing (HiPC 2006), Bangalore, India, Springer, LNCS Vol. 4297, pp. 363-374, 2006.
- A. Wirawan, B. Schmidt: "Parallel Discovery of Transcription Factor Binding Sites", IEEE Asia Pacific Conference on Circuits and Systems (APCCAS 2006), Singapore, IEEE Press, 2006
- T. Oliver, B. Schmidt, J. Yanto, D. Maskell: "Accelerating the Viterbi Algorithm for Profile Hidden Markov Models using Reconfigurable Hardware", International Conference on Computational Science (ICCS 2006), Reading, UK, Springer-Verlag, LNCS Vol. 3991, Part I, pp. 522-529, 2006
- M. Rajapakse, B. Schmidt, V. Brusic: "Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs", 4th European Workshop on Evolutionary Computation and Machine Learning in Bioinformatics (EvoBIO 2006), Budapest, Hungary, Springer, LNCS Vol. 3907, pp. 149-158, 2006
- W. Liu, B. Schmidt, G. Voss, A. Schroeder, W. Mueller-Wittig: "Bio-Sequence Database Scanning on a GPU", 5th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2006), Rhode Island, Greece, IEEE Press, 2006
- M. Rajapakse, B. Schmidt, V. Brusic: "Pareto-Optimal Motif for Predicting Peptide Binders", 16th International Conference on Genomic Informatics (GIW 2005), Yokohama, Japan, 2005
- G. Voss, A. Schröder, W. Müller-Wittig, B. Schmidt: "Using Graphics Hardware to Accelerate Biological Sequence Analysis", IEEE Tencon 2005, Melbourne, Australia, 2005
- W. Liu, B. Schmidt: "Mapping of Hierarchical Parallel Genetic Algorithms for Protein Folding onto Computational Grids", IEEE Tencon 2005, Melbourne, Australia, 2005.
- J. Yanto, T. Oliver, B. Schmidt, D. Maskell: "Biological Sequence Analysis with Hidden Markov Models on an FPGA", 10th Asia-Pacific Computer Systems Architecture Conference (ACSAC 2005), Singapore, Springer-Verlag LNCS Vol. 3740, 2005.
- C. Chen, B. Schmidt: "Parallel Construction of Large Suffix Trees on a PC Cluster", Euro-Par 2005, Lisbon, Portugal, Springer-Verlag LNCS Vol. 3648, 2005.
- M. Rajapakse, L. Wyse, B. Schmidt, V. Brusic: âœDeriving Matrix of Peptide-MHC Interactions in Diabetic Mouse by Genetic Algorithmâ?, 6th International Conference on Intelligent Data Engineering and Automated Learning (IDEAL 2005), Brisbane, Australia, LNCS, Springer, 2005
- T. Oliver, B. Schmidt, D. Nathan, R. Clemens, D. Maskell: "Multiple Sequence Alignment on an FPGA", 11th International Conference on Parallel and Distributed Systems (ICPADS 2005), IEEE Computer Society Press, Fukuoka, Japan, 2005
- T. Oliver, B. Schmidt, D. Maskell, A.P. Vinod: "A Reconfigurable Architecture for Scanning Biosequence Databases", 2005 IEEE International Symposiumon Circuits and Systems (ISCAS 2005), Kobe, Japan, IEEE Computer Society Press, 2005
- W. Liu, B. Schmidt: "A Case Study on Pattern-based Systems for High Performance Computational Biology", 4th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2005), Denver, CO, IEEE Press, 2005
- T. Oliver, B. Schmidt, D. Maskell: "Hyper Customized Processors for Bio-Sequence Database Scanning on FPGAs", 13th ACM International Symposium on Field-Programmable Gate Arrays (FPGA 2005), Monterrey, CA, 2005.
- T. Liu, B. Schmidt: "Optimal local alignment in RNA secondary structures", BioMED 2005, Innsbruck, Austria, 2005.
- W. Liu, B. Schmidt: "A Tunable Coarse-Grained Parallel Algorithm for Irregular Dynamic Programming Applications", 11th Annual International Conference on High Performance Computing (HiPC 2004), Bangalore, India, Springer, LNCS Vol. 3296, 2004.
- C.X. Chen, B. Schmidt: "Load Balancing for Hierarchical Grid Computing: A Case Study", 11th Annual International Conference on High Performance Computing (HiPC 2004), Bangalore, Springer, LNCS Vol. 3296, 2004.
- W. Liu, B. Schmidt: "A Generic Parallel Pattern-based System for Bioinformatics", Euro-Par 2004, Pisa, Italy, Springer, LNCS Vol. 3149, 2004
- C.S.S. Tan, B. Schmidt: "Combining message-passing and inter-process communication in SMP-hybrid cluster for efficient parallel medical image analysis", APPLICATIONS OF DIGITAL IMAGE PROCESSING XXVII, Denver, CO, Proceedings of SPIE Vol. #5558, 2004
- T. Oliver, B. Schmidt: "High Performance Biosequence Database Scanning on Reconfigurable Platforms", 3rd IEEE International Workshop on High Performance Computational Biology (HiCOMB 2004), Santa Fe, NM, IEEE Press, 2004
- T. Liu, B. Schmidt: "Parallel RNA Sequence-Structure Alignment", 3rd IEEE International Workshop on High Performance Computational Biology (HiCOMB 2004), Santa Fe, NM, IEEE, 2004
- C.X. Chen, B. Schmidt: "Performance Analysis of Computational Biology Applications on Hierarchical Grid Systems", 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), Chicago, IL, IEEE, 2004.
- C.X. Chen, B. Schmidt: "Computing Large-Scale Alignments on a Multi-Cluster", IEEE International Conference on Cluster Computing (Cluster 2003), Hong Kong, 2003.
- W. Liu, B. Schmidt: "Parallel Design Pattern for Computational Biology and Scientific Computing", IEEE International Conference on Cluster Computing (Cluster 2003), Hong Kong, 2003
- M. Schimmler, B. Schmidt, S. Heithecker: "An Area-Efficient Bit-Serial Integer Multiplier", The 2003 International Conference on VLSI (VLSI'03), Las Vegas, NV, 2003
- M. Schimmler, B. Schmidt, H.-W. Lang: "Design of a Bit-serial Floating-Point Unit for a Fine-Grained Parallel Processor Array", The 2003 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'03), Las Vegas, NV, 2003
- B. Schmidt, F. Lin, A. Laud, Y. Santoso: "Parallel Detection of Regulatory Elements with gMP", 2nd IEEE International Workshop on High Performance Computational Biology (HiCOMB 2003), Nice, France, IEEE Press, 2003
- L. Wang, W. Cai, B. Schmidt, B.S. Lee, W. Jie: "Biogrid Computing Platform: Parallel computing for protein alignment analysis", HPC Asia 2002, Bangalore, India, 2002
- H. Schröder, B. Schmidt, J. Zhu: âœA new approach to protein structure predictionâ?, The International Conference on Bioinformatics (InCoB 2002), Bangkok, Thailand, 2002
- B. Schmidt, M. Schimmler, W. Adi: "Area efficient modular arithmetic for mobile security", The 2002 International Conference on Wireless Networks (ICWN'02), Las Vegas, NV, 2002
- B. Schmidt, H. Schroeder, M. Schimmler: "Massively Parallel Solutions for Molecular Sequence Analysis", IEEE International Workshop on High Performance Computational Biology (HiCOMB 2002), Ft Lauderdale, FL, IEEE Press, 2002
- B. Schmidt, H. Schroeder: "Massively Parallel Sequence Analysis with Hidden Markov Models", International Conference on Scientific & Engineering Computation (IC-SEC 2002), Singapore, World Scientific, 2002
- L. Wang, W. Cai, B. Schmidt, B.S. Lee, W. Jie: "Replica Selection Framework for Bio-Grid Computing", International Conference on Scientific & Engineering Computation (IC-SEC 2002), Singapore, World Scientific, 2002
- H. Schroeder, B. Schmidt: "Image Processing Algorithms for on-board Computing", 3rd International Conference on Information, Communications & Signal Processing (ICICS'01), Singapore, 2001
- L.S. Chin, H. Schroeder, B. Schmidt: "Parallel Volume Rendering using Slice Orientation", 3rd International Conference on Information, Communications & Signal Processing (ICICS'01), Singapore 2001
- B. Schmidt, H. Schroeder, M. Schimmler: "Protein Sequence Comparison on the Instruction Systolic Array", 6th International Conference on Parallel Computing Technologies (PaCT'01), Novosibirsk, Russia, Springer-Verlag LNCS Vol. 2127, 2001
- B. Schmidt, H. Schroeder, M. Schimmler: "Scanning Biosequence Databases on a Hybrid Parallel Architecture", Euro-Par 2001, Manchester, UK, Springer LNCS Vol. 2150, 2001.
- B. Schmidt, H. Schroeder, T. Srikanthan: "A SIMD Solution to Biosequence Database Scanning", Parallel Computing 2001 (ParCo 2001), Naples, Italy, Imperial College Press, 2001.
- L.S. Chin, B. Schmidt, H. Schroeder: "Volume Rendering Using the Instruction Systolic Array Concept", Asia-Pacific Conference on Computational Mechanics, Sydney, Australia, 2001
- B. Schmidt: "Design of a Parallel Accelerator for Volume Rendering", Euro-Par 2000, Munich, Germany, Springer LNCS Vol. 1900, pp. 1095-1104, 2000.
- B. Schmidt, H. Schroeder: "Volume Visualisation on a Hybrid Parallel Architecture", 7th Australasian Conference on Parallel and Real-Time Systems (PART 2000), Sydney, Australia, Springer, 2000.
- B. Schmidt, M. Schimmler: "A Parallel Accelerator Architecture for Multimedia Video Compression", Euro-Par 1999, Toulouse, France, Springer LNCS Vol. 1685, 1999.
- B. Schmidt, M. Schimmler, H. Schroeder: "Long Operand Arithmetic on Instruction Systolic Computer Architectures and its Application for RSA Cryptography", Euro-Par 1998, Southampton, UK, Springer-Verlag LNCS Vol. 1470, 1998
- B. Schmidt, M. Schimmler, H. Schroeder: "The Instruction Systolic Array in Tomographic Image Reconstruction Applications", 5th Annual Australasian Conference on Parallel and Real-time Systems (PART 1998), Adelaide, Australia, Springer, 1998
- B. Schmidt, M. Schimmler, H. Schroeder: "Morphological Hough Transform on the Instruction Systolic Array", Euro-Par 1997, Passau, Germany, Springer LNCS Vol. 1300, 1997
- U. Mahlmeister, B. Schmidt, G. Sommer: "Preattentive Colour Features by Steerable Filters", 17th DAGM Symposium Pattern Recognition (DAGM'95), Bielefeld, Germany, Springer, 1995
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