APBC 2005
Graduate Student Satellite Symposium
LT3, Nanyang Technological University
Saturday, 15 January, 2005
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8:30 – 9:00 |
Registration, Outside LT 3 |
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9:00 – 9:15 |
Welcome address by Guest-of-honor |
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9:15 – 10:45 |
Session 1 (Chair: Assoc Prof Jagath C Rajapakse) |
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MULTIPRED: A Computational System For Prediction Of Promiscuous HLA Class I Binders ZHANG Guang Lan, KWOH Chee Keong, and BRUSIC Vladimir |
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Antigenic Diversity Analysis Of Complete Dengue Viral Genome: Implications For Vaccine Design KHAN Asif Mohammad, TAN Tin Wee, and BRUSIC Vladimir |
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An enhanced web-based sirna target selection platform with a novel pattern matching algorithm Chee Hong WONG, OOI Hong Sain, Yun Ping LIM, Yuin Han LOH, and Huck Hui NG |
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Modeling immune dynamics of HIV-1 infection using multi-agent simulation GUO Zaiyi, HAN Hann Kwang, and TAY Joc Cing |
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Weak
motif recognition in DNA sequences YANG
Xiao and RAJAPAKSE Jagath Chandana |
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Molecular dynamics simulations of helical antimicrobial peptides: taking structural bioinformatics into the dynamic regime KHANDELIA,
Himanshu, KAZNESSIS, N. Yiannis |
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10:45 – 11:15 |
Tea
Break |
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11:15 – 13:15 |
Session
2 (Chair:
Assoc Prof Chen Yuzong) |
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Antigenic diversity analysis of West Nile Virus proteome LEE Xunjian, Kenneth and
BRUSIC Vladimir |
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A highly scalable protein secondary structure prediction tool QI Yutao and LIN Feng |
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Automating the extraction and aggregation of viral sequence information from diverse sources MIOTTO Olivo, TAN Tin Wee, and BRUSIC Vladimir |
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Antigenic diversity analysis of influenza a virus proteins HEINY Tan Anling, and BRUSIC
Vladimir |
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Cluster validation for gene
expression data using Akaike information criterion SUDHAKAR Jonnalagadda and RAJAGOPALAN Srinivasan |
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A comparative study of the methods on effective synthesis of oligo nucleotides NING Kang, CHOI Kwok Pui, LEONG Hon Wai, and ZHANG Louxin |
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Development of a procedure for the sensitive detection of correct folds and misfolds: application to fold prediction and homology modeling S. KISHORE, A.MANONMANI and R.SOWDHAMINI |
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FASSM: application tool toward family specific sequence annotation, case study in ferredoxin fold KUMAR Gaurav, Nitin GUPTA, Shewta JAIN and R. SOWDHAMINI |
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13:15 – 14:30 |
Lunch |
| 14:30 – 16:30 | Session 3 (Chair: Ast Prof Li Jinming) |
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CandiVF, a molecular database of candida albicans functional virulence factors TONGCHUSAK S, CHAIYAROJ SC, BRUSIC V |
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| A
hybrid algorithm for motif discovery from DNA sequences
WIJAYA Edward, Kanagasabai RAJARAMAN, Manisha BRAHMACHARY, BAJIC Vladimir B. and SUNG Sam |
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| SCORPION
2: a database for structure-function analysis of native and mutant
scorpion toxins
Paul T.J. TAN, Shoba RANGANATHAN, and Vladimir BRUSIC |
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| A
new petri net based modeling method for signaling pathways with a focus on
enzymes
Chen LI, Qi-Wei GE, Mitsuru NAKATA, Hiroshi MATSUNO, Satoru MIYANO |
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| Classifying
eukaryotes with the discrete function learning algorithm
ZHENG Yun, KWOH Chee Keong |
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| Study
knot protein and its receptor with protein modeling
SU Li, CAI Yiyu |
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| Bioware:
a framework for bioinformatics data retrieval, annotation, and publishing
KOH Judice L.Y., LEE Mong Li, and BRUSIC Vladimir |
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| Classifying
protein folds using multi-level information of protein structures
AUNG Zeyar |
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| 16:30 – 17:00 | Tea Break |
| 17:00 – 17:30 | Announcement of Result |
| End of Program |